Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015867525.1_cds_XP_016433149.1_29331
CDS Infomation

[gene=LOC107759671] [db_xref=GeneID:107759671] [protein=scarecrow-like protein 15] [protein_id=XP_016433149.1] [location=complement(158861..160489)] [gbkey=CDS]
Sequence

ATGAAAGTGCCCTTTTCCTCTAATGACAACGTGAGTTCAAAACCATTGATTAGCAATAAC
AACAACAACAATCTCCAGAACGCTACTTTTCCGGCCGCCACCAACGGCCCTAACTTGTGC
TACGAGCCCAAATCAGTCCTCGAACTCCGCCGCAGCCCCAGCCCTATCGTCGAGAAGCAG
GTGATAACAAATCCCGATTTCTCCGCCCTTTGCGGCGGCGACGATCCTCTCCAGCTAGGA
GATCATGTTCTGAGCAACTTCGAAGATTGGGATTCTTTGATGAGAGAACTTGGGTTACAA
GACGATTCTGCTTCACTTTCAAAATCTAACCCTCAACTCAGCCTTACACAAAGCGAGTCG
CTGACTCAGTTCCATAACCTCTCCGAATTCTCAGCTGACTCGACTCAGTTCCCTACATCT
GATTTTTCTTTCTCCGAGAATTTCCCTCAGCAATTTCAATCGGTGAATCAGGGAAATTAC
ATTAACGCCCTTGATCTCTCCGGTGATATCCACCAGAATAATTGGAACGTAGGATTTGAT
TACGTGGATGAGCTCATTCGTTTCACTGAATGTTTCGAAACCAACGCTTTCCAGCTCGCA
CATGTGATACTGGCACGGCTCAATCAACGGCTCAGATCCGCCGCCGGAAAACCTCTTCAA
CGAGCTGCCTTTTACTTCAAGGAAGCACTTCAAGCCCAACTCGCCGGGTCAACTCGACAG
ACTCGCCCTGCCAGCTCATCCGACGTGATTCAGACCATCAAATCCTACAAAATTTTCTCA
AACATATCTCCAATCCCTATGTTCTCCAGCTTCACGGCGAACCAAGCCGTACTCGAGGCA
GTCGACGGCTCGATGCTAGTCCACGTCATCGACTTCGACATCGGACTCGGAGGCCACTGG
GCTTCCTTCATGAAAGAGTTAGCCGATAAAGCCGAGTGTCGTAAAGCCAACGCGCCGGTT
CTTCGAATTACGGCTCTAGTCCCTGAAGAGTACGCTGTGGAATCGAGGTTAATCAGAGAA
AATTTAACACAATTTGCTCGTGAACTCAATATCGGTTTCGAAATAGATTTTGTTCTAATT
CGAACTTTCGAGTTGTTATCCTTCAAAGCAATAAAGTTCATGGACGGGGAGAAGACAGCG
GTGCTTTTATCCCCCGCTATCTTCCGGCGGATCGGGTCAGGGTTTGTTAACGACCTCCGT
CGTATTTCCCCTAACATGGTGGTACACGTGGACAGCGAAGGGCTGATGGGTTACGGAACC
GCGTCGTTTCGTCAGACGGTGATTGATGGGTTGGAATTTTACTCTACGTTGCTGGAATCA
CTAGAAGCAGCAAATATCGGTGGCGGGAATTGTGGGGATTGGATGAGGAAAATTGAGAAT
TTCGTGCTGTTTCCGAAGATAGTGGAGATGGTGGCGGCAGTAGGGCGGCGAGGAGGTGGC
TCGTGGAAGGATGCGATGGTGGCTGCCGGATTCCGGCCGGTGGGATTAAGCCAGTTTGCG
GATTTTCAAGCGGATTGTTTGTTGGGGAGAGTACAGGTTAGGGGATTCCACGTGGCGAAG
AGACAAGCGGAGATGTTGCTGTGCTGGCATGATAGGGCCCTAGTAGCCACGTCAGCTTGG
AGGTGTTAA

Peptide Sequence

PEP ID

XP_016433149.1
PEP Infomation

PREDICTED: scarecrow-like protein 15 [Nicotiana tabacum]
Sequence

MKVPFSSNDNVSSKPLISNNNNNNLQNATFPAATNGPNLCYEPKSVLELRRSPSPIVEKQ
VITNPDFSALCGGDDPLQLGDHVLSNFEDWDSLMRELGLQDDSASLSKSNPQLSLTQSES
LTQFHNLSEFSADSTQFPTSDFSFSENFPQQFQSVNQGNYINALDLSGDIHQNNWNVGFD
YVDELIRFTECFETNAFQLAHVILARLNQRLRSAAGKPLQRAAFYFKEALQAQLAGSTRQ
TRPASSSDVIQTIKSYKIFSNISPIPMFSSFTANQAVLEAVDGSMLVHVIDFDIGLGGHW
ASFMKELADKAECRKANAPVLRITALVPEEYAVESRLIRENLTQFARELNIGFEIDFVLI
RTFELLSFKAIKFMDGEKTAVLLSPAIFRRIGSGFVNDLRRISPNMVVHVDSEGLMGYGT
ASFRQTVIDGLEFYSTLLESLEAANIGGGNCGDWMRKIENFVLFPKIVEMVAAVGRRGGG
SWKDAMVAAGFRPVGLSQFADFQADCLLGRVQVRGFHVAKRQAEMLLCWHDRALVATSAW
RC

Transcript Sequence

Gene sequence data has not been registered.